您好，欢迎访问西藏自治区农牧科学院 机构知识库！

FishPIE: A universal phylogenetically informative exon markers set for ray-finned fishes

文献类型： 外文期刊

作者： Mu, Xidong 1 ; Yang, Yexin 1 ; Sun, Jinhui 2 ; Liu, Yi 1 ; Xu, Meng 1 ; Shao, Changwei 3 ; Chu, Ka Hou 4 ; Li, Wei 1 ; Liu, Chao 1 ; Gu, Dangen 1 ; Fang, Miao 1 ; Zhang, Chi 6 ; Liu, Fei 6 ; Song, Hongmei 1 ; Wang, Xuejie 1 ; Chen, Jiehu 8 ; Ma, Ka Yan 9 ;

作者机构： 1.Chinese Acad Fishery Sci, Pearl River Fisheries Res Inst, Guangdong Modern Recreat Fisheries Engn Technol Ct, Key Lab Prevent & Control Aquat Invas Alien Specie, Guangzhou 510380, Peoples R China

2.Tianjin Agr Univ, Coll Fisheries, Tianjin 300384, Peoples R China

3.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Key Lab Sustainable Dev Marine Fisheries, Lab Marine Fisheries Sci & Food Prod Proc,Minist A, Qingdao 266237, Peoples R China

4.Chinese Univ Hong Kong, Sch Life Sci, Simon FS Li Marine Sci Lab, Hong Kong, Peoples R China

5.Minist Agr, Key Lab Trop & Subtrop Fishery Resource Applicat &, Guangzhou 510380, Peoples R China

6.Tibet Acad Agr & Anim Husb Sci, Inst Fisheries Sci, Lhasa 510006, Peoples R China

7.Key Lab Aquat Anim Immune Technol Guangdong Prov, Guangzhou 510380, Peoples R China

8.Sci Corp Gene SCGene, Guangzhou 510000, Peoples R China

9.Sun Yat sen Univ, Sch Ecol, State Key Lab Biocontrol, Southern Marine Sci & Engn Guangdong Lab Zhuhai, Guangzhou 510006, Peoples R China

期刊名称：ISCIENCE （ 影响因子：6.107； 五年影响因子：6.233 ）

ISSN：

年卷期： 2022 年 25 卷 9 期

页码：

收录情况： SCI

摘要： Understanding the evolutionary history of the highly diverse ray-finned fishes has been challenging, and the development of more universal primers for phyloge-netic analyses may help overcoming these challenges. We developed FishPIE, a nested PCR primer set of 82 phylogenetically informative exon markers, and tested it on 203 species from 31 orders of Actinopterygii. We combined ortholo-gous sequences of the FishPIE markers obtained from published genomes and transcriptomes and constructed the phylogeny of 710 species belonging to 190 families and 60 orders. The resulting phylogenies had topologies comparable to previous phylogenomic studies. We demonstrated that the FishPIE markers could address phylogenetic questions across broad taxonomic levels. By incorpo-rating the newly sequenced taxa, we were able to shed new light on the phylog-eny of the highly diverse Cypriniformes. Thus, FishPIE holds great promise for generating genetic data for broad taxonomic groups and accelerating our under-standing of the fish tree of life.

  • 相关文献
作者其他论文 更多>>
置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：西藏自治区农牧科学院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台